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mir-2490 mir-2490 stem loop [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12798492, updated on 11-Sep-2024

Summary

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Official Symbol
mir-2490provided by FlyBase
Official Full Name
mir-2490 stem loopprovided by FlyBase
Primary source
FLYBASE:FBgn0262293
Locus tag
Dmel_CR43000
See related
miRBase:MI0011579; AllianceGenome:FB:FBgn0262293
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR43000; dme-mir-2490; Dmel\CR43000
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Genomic context

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See mir-2490 in Genome Data Viewer
Location:
40F7-40F7; 2-54 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (23168825..23168899)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2LHet NW_001848855.1 (27336..27410)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43242 Neighboring gene Spf45 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44268 Neighboring gene long non-coding RNA:CR46450

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Adaptive evolution of testis-specific, recently evolved, clustered miRNAs in Drosophila. Mohammed J, et al. RNA, 2014 Aug. PMID 24942624, Free PMC Article
  2. Clusters of microRNAs emerge by new hairpins in existing transcripts. Marco A, et al. Nucleic Acids Res, 2013 Sep. PMID 23775791, Free PMC Article
  3. Functional characterization of Drosophila microRNAs by a novel in vivo library. Schertel C, et al. Genetics, 2012 Dec. PMID 23051640, Free PMC Article
  4. Dissection of the microRNA Network Regulating Hedgehog Signaling in Drosophila. He T, et al. Front Cell Dev Biol, 2022. PMID 35573695, Free PMC Article
  5. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • mir-2490-RA; Dmel\mir-2490-RA; CR43000-RA; Dmel\CR43000-RA
  • mir-2490-RB; Dmel\mir-2490-RB; CR43000-RB; Dmel\CR43000-RB
  • mir-2490-RM; Dmel\mir-2490-RM; CR43000-RM; Dmel\CR43000-RM

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    23168825..23168899
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_047696.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials