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mir-987 mir-987 stem loop [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12798383, updated on 9-Dec-2024

Summary

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Official Symbol
mir-987provided by FlyBase
Official Full Name
mir-987 stem loopprovided by FlyBase
Primary source
FLYBASE:FBgn0262220
Locus tag
Dmel_CR42927
See related
miRBase:MI0005846; AllianceGenome:FB:FBgn0262220
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR42927; dme-mir-987; dme-miR-987; Dmel\CR42927; miR-987
Summary
Predicted to be involved in miRNA-mediated post-transcriptional gene silencing. Predicted to be part of RISC complex. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See mir-987 in Genome Data Viewer
Location:
45C6-45C6; 2-60 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (9313023..9313116, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (5200528..5200621, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene DNA fragmentation factor-related protein 2 Neighboring gene long non-coding RNA:CR45918 Neighboring gene Myd88 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Odorant receptor 45a Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Visualization of nucleotide substitutions in the (micro)transcriptome. Naqvi A, et al. BMC Genomics, 2014. PMID 25055822, Free PMC Article
  2. miR-210 controls the evening phase of circadian locomotor rhythms through repression of Fasciclin 2. Niu Y, et al. PLoS Genet, 2019 Jul. PMID 31356596, Free PMC Article
  3. Hierarchical rules for Argonaute loading in Drosophila. Czech B, et al. Mol Cell, 2009 Nov 13. PMID 19917252, Free PMC Article
  4. MicroRNAs That Contribute to Coordinating the Immune Response in Drosophila melanogaster. Atilano ML, et al. Genetics, 2017 Sep. PMID 28706002, Free PMC Article
  5. Genome-wide assessment of post-transcriptional control in the fly brain. Mezan S, et al. Front Mol Neurosci, 2013. PMID 24367289, Free PMC Article

See all (32) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • mir-987-RA; Dmel\mir-987-RA; CR42927-RA; Dmel\CR42927-RA
  • mir-987-RB; Dmel\mir-987-RB; CR42927-RB; Dmel\CR42927-RB
  • mir-987-RM; Dmel\mir-987-RM; CR42927-RM; Dmel\CR42927-RM

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in miRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of RISC complex IEA
Inferred from Electronic Annotation
more info
  

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    9313023..9313116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_048067.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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Molecular Biology Databases
Research Materials