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snoRNA:gcl-a [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12798382, updated on 11-Sep-2024

Summary

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Official Symbol
snoRNA:gcl-aprovided by FlyBase
Primary source
FLYBASE:FBgn0263463
Locus tag
Dmel_CR43578
See related
AllianceGenome:FB:FBgn0263463
Gene type
ncRNA
RNA name
snoRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR43578; Dmel\CR43578; ncRNA_47
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Genomic context

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See snoRNA:gcl-a in Genome Data Viewer
Location:
44E3-44E3; 2-59 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (8724905..8725065)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (4612410..4612570)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Peptidoglycan recognition protein SC2 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene germ cell-less Neighboring gene uncharacterized protein Neighboring gene stambha A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of novel non-coding RNAs using profiles of short sequence reads from next generation sequencing data. Jung CH, et al. BMC Genomics, 2010 Feb 1. PMID 20113528, Free PMC Article
  2. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • snoRNA:gcl-a-RA; Dmel\snoRNA:gcl-a-RA; CR43578-RA; Dmel\CR43578-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    8724905..8725065
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_048066.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials