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lncRNA:CR43357 long non-coding RNA:CR43357 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12798222, updated on 11-Sep-2024

Summary

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Official Symbol
lncRNA:CR43357provided by FlyBase
Official Full Name
long non-coding RNA:CR43357provided by FlyBase
Primary source
FLYBASE:FBgn0263089
Locus tag
Dmel_CR43357
See related
AllianceGenome:FB:FBgn0263089
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR43357; Dmel\CR43357
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Genomic context

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See lncRNA:CR43357 in Genome Data Viewer
Location:
35C3-35C3; 2-51 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (15202259..15203967)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (15202259..15203967)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Seminal fluid protein 35C Neighboring gene long non-coding RNA:CR44196 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article
  2. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
  3. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR43357-RA; Dmel\lncRNA:CR43357-RA; CR43357-RA; Dmel\CR43357-RA
  • lncRNA:CR43357-RB; Dmel\lncRNA:CR43357-RB; CR43357-RB; Dmel\CR43357-RB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    15202259..15203967
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_047959.1 RNA Sequence

    Status: REVIEWED

  2. NR_124275.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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