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cat catalase [ Dicentrarchus labrax (European seabass) ]

Gene ID: 127352782, updated on 3-Dec-2024

Summary

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Gene symbol
cat
Gene description
catalase
See related
Ensembl:ENSDLAG00005023775
Gene type
protein coding
RefSeq status
MODEL
Organism
Dicentrarchus labrax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Moronidae; Dicentrarchus
Orthologs
human zebrafish all
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Genomic context

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See cat in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_02 current dlabrax2021 (GCF_905237075.1) Unplaced Scaffold NW_026136720.1 (19663142..19676250, complement)

NW_026136720.1Genomic Context describing neighboring genes Neighboring gene mannose-binding protein C Neighboring gene dispanin subfamily A member 2b-like Neighboring gene uncharacterized LOC127352797 Neighboring gene synaptotagmin XII Neighboring gene pseudopodium-enriched atypical kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026136720 Unplaced Scaffold Reference dlabrax2021 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hydrogen peroxide IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catalase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_905237075.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference dlabrax2021 Primary Assembly

Genomic

  1. NW_026136720.1 Reference dlabrax2021 Primary Assembly

    Range
    19663142..19676250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051381465.1 → XP_051237425.1  catalase

    UniProtKB/TrEMBL
    A0A8C4IF59, A0A8P4K711
    Related
    ENSDLAP00005056773.1, ENSDLAT00005060237.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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