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LOC127118464 protein TIC110, chloroplastic [ Pisum sativum (garden pea) ]

Gene ID: 127118464, updated on 3-Dec-2024

Summary

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Gene symbol
LOC127118464
Gene description
protein TIC110, chloroplastic
Locus tag
KIW84_021671
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Pisum sativum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum
Also known as
IAP100; IEP110; TIC110; psIEP110
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Genomic context

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See LOC127118464 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
100 current CAAS_Psat_ZW6_1.0 (GCF_024323335.1) 2 NC_066580.1 (130481083..130488912, complement)

Chromosome 2 - NC_066580.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127122232 Neighboring gene uncharacterized LOC127122233 Neighboring gene putative tRNA pseudouridine synthase Neighboring gene uncharacterized LOC127118467

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066580.1 Chromosome 2 Reference CAAS_Psat_ZW6_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Topology of IEP110, a component of the chloroplastic protein import machinery present in the inner envelope membrane. Lübeck J, et al. EMBO J, 1996 Aug 15. PMID 8861951, Free PMC Article
  2. Interaction of the protein import and folding machineries of the chloroplast. Kessler F, et al. Proc Natl Acad Sci U S A, 1996 Jul 23. PMID 8755536, Free PMC Article
  3. De novo assembly and characterisation of the field pea transcriptome using RNA-Seq. Sudheesh S, et al. BMC Genomics, 2015 Aug 16. PMID 26275991, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein import into chloroplast stroma IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TOC-TIC supercomplex I IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein TIC110, chloroplastic
Names
Chloroplast inner envelope protein, 110 kDa
Translocon at the inner envelope membrane of chloroplasts 110
chloroplast inner envelope protein, 110 kD (IEP110)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001427355.1 → NP_001414284.1  protein TIC110, chloroplastic

    Status: VALIDATED

    Source sequence(s)
    GCMF01000351, GHVW02020387
    UniProtKB/TrEMBL
    A0A9D5B4A8, A0A9D5B5N7

RefSeqs of Annotated Genomes: Pisum sativum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Psat_ZW6_1.0

Genomic

  1. NC_066580.1 Reference CAAS_Psat_ZW6_1.0

    Range
    130481083..130488912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051048671.1 → XP_050904628.1  protein TIC110, chloroplastic

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O24303.1 GenPept UniProtKB/Swiss-Prot:O24303

Gene LinkOut

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