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LOC127014669 damage-control phosphatase ARMT1-like [ Gymnogyps californianus (California condor) ]

Gene ID: 127014669, updated on 3-Aug-2024

Summary

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Gene symbol
LOC127014669
Gene description
damage-control phosphatase ARMT1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Gymnogyps californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Cathartidae; Gymnogyps
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Genomic context

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See LOC127014669 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM1813914v2 (GCF_018139145.2) 3 NC_059473.1 (56616394..56683941)

Chromosome 3 - NC_059473.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 2 Neighboring gene required for meiotic nuclear division 1 homolog Neighboring gene estrogen receptor 1 Neighboring gene spectrin repeat containing nuclear envelope protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059473.1 Chromosome 3 Reference ASM1813914v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 170-like; damage-control phosphatase ARMT1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_018139145.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1813914v2

Genomic

  1. NC_059473.1 Reference ASM1813914v2

    Range
    56616394..56683941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050894165.1 → XP_050750122.1  coiled-coil domain-containing protein 170-like isoform X1

  2. XM_050894168.1 → XP_050750125.1  damage-control phosphatase ARMT1-like isoform X4

  3. XM_050894167.1 → XP_050750124.1  coiled-coil domain-containing protein 170-like isoform X3

  4. XM_050894166.1 → XP_050750123.1  coiled-coil domain-containing protein 170-like isoform X2

Nucleotide Protein
Heading Accession and Version

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