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LOC124906162 small nucleolar RNA U13 [ Homo sapiens (human) ]

Gene ID: 124906162, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124906162
Gene description
small nucleolar RNA U13
Gene type
snoRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124906162 in Genome Data Viewer
Location:
2p25.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (9532242..9532345, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (9557260..9557363, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15277 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15278 Neighboring gene cleavage and polyadenylation specific factor 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:9614491-9615258 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:9615739-9616299 Neighboring gene isoamyl acetate hydrolyzing esterase 1 (putative) Neighboring gene ADAM metallopeptidase domain 17 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15279 Neighboring gene Sharpr-MPRA regulatory region 4047 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11135 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11136 Neighboring gene Sharpr-MPRA regulatory region 1969 Neighboring gene uncharacterized LOC101929643 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15280 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15281 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15282 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:9769712-9770614 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11137

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    9532242..9532345 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088750.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    9557260..9557363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007073080.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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