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LOC124905173 small Cajal body-specific RNA 17 [ Homo sapiens (human) ]

Gene ID: 124905173, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124905173
Gene description
small Cajal body-specific RNA 17
See related
Ensembl:ENSG00000252143
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124905173 in Genome Data Viewer
Location:
22q11.21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (21544897..21545039)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (21803342..21803484, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol 4-kinase alpha pseudogene 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:21844103-21844908 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:21845788-21846695 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:21846696-21847602 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:21847603-21848509 Neighboring gene MPRA-validated peak4465 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:21853495-21854090 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:21864487-21865084 Neighboring gene uncharacterized LOC124905165 Neighboring gene small Cajal body-specific RNA 18 Neighboring gene RN7SK pseudogene 221

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    21544897..21545039
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007068177.1 RNA Sequence

    Related
    ENST00000516334.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    21803342..21803484 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007090822.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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