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LOC124900377 small nucleolar RNA SNORA1 [ Homo sapiens (human) ]

Gene ID: 124900377, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124900377
Gene description
small nucleolar RNA SNORA1
See related
Ensembl:ENSG00000201541
Gene type
snoRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124900377 in Genome Data Viewer
Location:
16p12.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (24333415..24333547, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (24610270..24610402, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene protein kinase C beta Neighboring gene NANOG hESC enhancer GRCh37_chr16:24219906-24220465 Neighboring gene microRNA 1273h Neighboring gene MED14-independent group 3 enhancer GRCh37_chr16:24257631-24258830 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:24267404-24268131 Neighboring gene long intergenic non-protein coding RNA 2194 Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:24327354-24327854 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:24354853-24355354 Neighboring gene NANOG hESC enhancer GRCh37_chr16:24368887-24369391 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr16:24392929-24394128 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:24394102-24394791 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10599 Neighboring gene RNA, U7 small nuclear 24 pseudogene Neighboring gene uncharacterized LOC105371143 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr16:24493839-24494713

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    24333415..24333547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007065226.1 RNA Sequence

    Related
    ENST00000364671.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    24610270..24610402 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087075.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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