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st8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [ Hypomesus transpacificus ]

Gene ID: 124487958, updated on 12-Sep-2024

Summary

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Gene symbol
st8sia4
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
See related
EnsemblRapid:ENSHTAG00005001298
Gene type
protein coding
RefSeq status
MODEL
Organism
Hypomesus transpacificus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Stomiati; Osmeriformes; Osmeridae; Hypomesus
Orthologs
human zebrafish all
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Genomic context

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See st8sia4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fHypTra1 (GCF_021917145.1) Unplaced Scaffold NW_025813699.1 (337314..355424, complement)

NW_025813699.1Genomic Context describing neighboring genes Neighboring gene receptor accessory protein 5 Neighboring gene chromodomain helicase DNA binding protein 1 Neighboring gene zinc finger protein 862-like Neighboring gene peptidylglycine alpha-amidating monooxygenase Neighboring gene diphosphoinositol pentakisphosphate kinase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025813699 Unplaced Scaffold Reference fHypTra1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hypomesus transpacificus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHypTra1

Genomic

  1. NW_025813699.1 Reference fHypTra1

    Range
    337314..355424 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047050374.1 → XP_046906330.1  CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase isoform X1

    Related
    ENSHTAP00005002526.1, ENSHTAT00005002695.1

  2. XM_047050375.1 → XP_046906331.1  CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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