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ANKRD27 ankyrin repeat domain 27 [ Sceloporus undulatus (fence lizard) ]

Gene ID: 121937561, updated on 22-Mar-2024

Summary

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Gene symbol
ANKRD27
Gene description
ankyrin repeat domain 27
Gene type
protein coding
RefSeq status
MODEL
Organism
Sceloporus undulatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Phrynosomatidae; Phrynosomatinae; Sceloporus
Orthologs
human mouse all
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Genomic context

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See ANKRD27 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
31
Annotation release Status Assembly Chr Location
100 current SceUnd_v1.1 (GCF_019175285.1) 8 NC_056529.1 (9839572..9884903)

Chromosome 8 - NC_056529.1Genomic Context describing neighboring genes Neighboring gene nudix hydrolase 19 Neighboring gene regulator of G protein signaling 9 binding protein Neighboring gene neural-cadherin-like Neighboring gene neural-cadherin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056529.1 Chromosome 8 Reference SceUnd_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in early endosome to late endosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in tubular endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 27

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sceloporus undulatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SceUnd_v1.1

Genomic

  1. NC_056529.1 Reference SceUnd_v1.1

    Range
    9839572..9884903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042480864.1 → XP_042336798.1  ankyrin repeat domain-containing protein 27 isoform X1

    Conserved Domains (5) summary
    PHA02876
    Location:485 → 884
    PHA02876; ankyrin repeat protein; Provisional
    COG0666
    Location:394 → 533
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:752 → 783
    ANK; ANK repeat [structural motif]
    cl19569
    Location:269 → 368
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl39094
    Location:741 → 932
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_042480867.1 → XP_042336801.1  ankyrin repeat domain-containing protein 27 isoform X2

    Conserved Domains (5) summary
    PHA02876
    Location:485 → 884
    PHA02876; ankyrin repeat protein; Provisional
    COG0666
    Location:394 → 533
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:752 → 783
    ANK; ANK repeat [structural motif]
    cl19569
    Location:269 → 368
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl39094
    Location:741 → 883
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_042480868.1 → XP_042336802.1  ankyrin repeat domain-containing protein 27 isoform X3

    Conserved Domains (5) summary
    PHA02876
    Location:485 → 884
    PHA02876; ankyrin repeat protein; Provisional
    COG0666
    Location:394 → 533
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:752 → 783
    ANK; ANK repeat [structural motif]
    cl19569
    Location:269 → 368
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl39094
    Location:741 → 883
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_042480865.1 → XP_042336799.1  ankyrin repeat domain-containing protein 27 isoform X1

    Conserved Domains (5) summary
    PHA02876
    Location:485 → 884
    PHA02876; ankyrin repeat protein; Provisional
    COG0666
    Location:394 → 533
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:752 → 783
    ANK; ANK repeat [structural motif]
    cl19569
    Location:269 → 368
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl39094
    Location:741 → 932
    Ank_2; Ankyrin repeats (3 copies)

  5. XM_042480866.1 → XP_042336800.1  ankyrin repeat domain-containing protein 27 isoform X1

    Conserved Domains (5) summary
    PHA02876
    Location:485 → 884
    PHA02876; ankyrin repeat protein; Provisional
    COG0666
    Location:394 → 533
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:752 → 783
    ANK; ANK repeat [structural motif]
    cl19569
    Location:269 → 368
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl39094
    Location:741 → 932
    Ank_2; Ankyrin repeats (3 copies)

RNA

  1. XR_006105168.1 RNA Sequence

  2. XR_006105167.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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