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LanB1 laminin subunit beta-1 [ Anopheles merus ]

Gene ID: 121603767, updated on 24-May-2024

Summary

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Gene symbol
LanB1
Gene description
laminin subunit beta-1
See related
VectorBase:AMEM21_015430
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles merus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Orthologs
fruit fly all
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Genomic context

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See LanB1 in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
18
Annotation release Status Assembly Chr Location
100 current AmerM5.1 (GCF_017562075.2) 2R NC_054082.1 (3993129..4006388, complement)

Chromosome 2R - NC_054082.1Genomic Context describing neighboring genes Neighboring gene neuropeptide SIFamide receptor-like Neighboring gene uncharacterized LOC121603643 Neighboring gene eukaryotic translation initiation factor 6 Neighboring gene RNA-binding protein cabeza-like Neighboring gene diuretic hormone class 2 Neighboring gene cAMP-dependent protein kinase catalytic subunit 1 Neighboring gene remodeling and spacing factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054082.1 Chromosome 2R Reference AmerM5.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in basement membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of laminin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit beta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anopheles merus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AmerM5.1 Primary Assembly

Genomic

  1. NC_054082.1 Reference AmerM5.1 Primary Assembly

    Range
    3993129..4006388 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041904557.1 → XP_041760491.1  laminin subunit beta-1

    UniProtKB/TrEMBL
    A0A182V7S1
    Conserved Domains (5) summary
    smart00136
    Location:50 → 288
    LamNT; Laminin N-terminal domain (domain VI)
    smart00180
    Location:791 → 836
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:1203 → 1595
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:838 → 880
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    TIGR02168
    Location:1437 → 1780
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. XM_041904558.1 → XP_041760492.1  laminin subunit beta-1

    UniProtKB/TrEMBL
    A0A182V7S1
    Conserved Domains (5) summary
    smart00136
    Location:50 → 288
    LamNT; Laminin N-terminal domain (domain VI)
    smart00180
    Location:791 → 836
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:1203 → 1595
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:838 → 880
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    TIGR02168
    Location:1437 → 1780
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  3. XM_041904559.1 → XP_041760493.1  laminin subunit beta-1

    UniProtKB/TrEMBL
    A0A182V7S1
    Conserved Domains (5) summary
    smart00136
    Location:50 → 288
    LamNT; Laminin N-terminal domain (domain VI)
    smart00180
    Location:791 → 836
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:1203 → 1595
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:838 → 880
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    TIGR02168
    Location:1437 → 1780
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein Strain
Heading Accession and Version

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