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LOC121136395 putative RNA-binding protein 15B [ Mesocricetus auratus (golden hamster) ]

Gene ID: 121136395, updated on 16-Nov-2023

Summary

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Gene symbol
LOC121136395
Gene description
putative RNA-binding protein 15B
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
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Genomic context

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See LOC121136395 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429237.1 (16925..20784, complement)

NW_024429237.1Genomic Context describing neighboring genes Neighboring gene putative RNA-binding protein 15B Neighboring gene homeodomain-interacting protein kinase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024429237 Unplaced Scaffold Reference BCM_Maur_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: putative RNA-binding protein 15B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429237.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    16925..20784 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040736763.1 → XP_040592697.1  LOW QUALITY PROTEIN: putative RNA-binding protein 15B

    UniProtKB/TrEMBL
    A0A3Q0CTA1
    Conserved Domains (3) summary
    TIGR01628
    Location:318 → 496
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    smart00360
    Location:149 → 213
    RRM; RNA recognition motif
    cd12309
    Location:332 → 410
    RRM2_Spen; RNA recognition motif 2 (RRM2) found in the Spen (split end) protein family
Nucleotide Protein
Heading Accession and Version

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