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LCAT lecithin-cholesterol acyltransferase [ Puma yagouaroundi (jaguarundi) ]

Gene ID: 121045479, updated on 22-Mar-2024

Summary

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Gene symbol
LCAT
Gene description
lecithin-cholesterol acyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma yagouaroundi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See LCAT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current PumYag (GCF_014898765.1) Unplaced Scaffold NW_024412421.1 (19602655..19605912, complement)

NW_024412421.1Genomic Context describing neighboring genes Neighboring gene chymotrypsin like Neighboring gene proteasome 20S subunit beta 10 Neighboring gene solute carrier family 12 member 4 Neighboring gene dipeptidase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024412421 Unplaced Scaffold Reference PumYag Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylcholine-sterol O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylcholine-sterol acyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma yagouaroundi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumYag Primary Assembly

Genomic

  1. NW_024412421.1 Reference PumYag Primary Assembly

    Range
    19602655..19605912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040498425.1 → XP_040354359.1  phosphatidylcholine-sterol acyltransferase

    Conserved Domains (2) summary
    PLN02517
    Location:321 → 386
    PLN02517; phosphatidylcholine-sterol O-acyltransferase
    cl21494
    Location:48 → 239
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version

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