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LOC120673931 protein SRG1-like [ Panicum virgatum (switchgrass) ]

Gene ID: 120673931, updated on 4-Nov-2022

Summary

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Gene symbol
LOC120673931
Gene description
protein SRG1-like
Locus tag
PVAP13_5NG619800
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

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See LOC120673931 in Genome Data Viewer
Location:
chromosome: 5N
Exon count:
3
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 5N NC_053149.1 (69912369..69913982, complement)

Chromosome 5N - NC_053149.1Genomic Context describing neighboring genes Neighboring gene nuclear transcription factor Y subunit B-4-like Neighboring gene cullin-1-like Neighboring gene probable potassium transporter 2 Neighboring gene spermatogenesis-associated protein 20-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053149.1 Chromosome 5N Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein SRG1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053149.1 Reference P.virgatum_v5 Primary Assembly

    Range
    69912369..69913982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039954978.1 → XP_039810912.1  protein SRG1-like

    UniProtKB/TrEMBL
    A0A8T0S4Z0
    Conserved Domains (1) summary
    PLN02758
    Location:2 → 348
    PLN02758; oxidoreductase, 2OG-Fe(II) oxygenase family protein
Nucleotide Protein Strain
Heading Accession and Version

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