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LOC120671640 protein G1-like1 [ Panicum virgatum (switchgrass) ]

Gene ID: 120671640, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120671640
Gene description
protein G1-like1
Locus tag
PVAP13_4NG296500
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

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See LOC120671640 in Genome Data Viewer
Location:
chromosome: 4N
Exon count:
2
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 4N NC_053148.1 (45739660..45741645, complement)

Chromosome 4N - NC_053148.1Genomic Context describing neighboring genes Neighboring gene tubulin beta-1 chain Neighboring gene uncharacterized LOC120669459 Neighboring gene uncharacterized LOC120671641 Neighboring gene protein transport protein Sec61 subunit beta-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053148.1 Chromosome 4N Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to light stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein G1-like1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053148.1 Reference P.virgatum_v5 Primary Assembly

    Range
    45739660..45741645 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039952032.1 → XP_039807966.1  protein G1-like1

    UniProtKB/TrEMBL
    A0A8T0TA80
    Conserved Domains (1) summary
    pfam04852
    Location:19 → 136
    DUF640; Protein of unknown function (DUF640)
Nucleotide Protein Strain
Heading Accession and Version

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