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pcp4a Purkinje cell protein 4a [ Pimephales promelas (fathead minnow) ]

Gene ID: 120481750, updated on 21-Mar-2024

Summary

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Gene symbol
pcp4a
Gene description
Purkinje cell protein 4a
Gene type
protein coding
RefSeq status
MODEL
Organism
Pimephales promelas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
Orthologs
zebrafish all
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Genomic context

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See pcp4a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121210.1 (16905728..16921250)

NW_024121210.1Genomic Context describing neighboring genes Neighboring gene mitochondrial intermediate peptidase b Neighboring gene immunoglobulin superfamily, member 5a Neighboring gene serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a Neighboring gene alkaline ceramidase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024121210 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calmodulin regulator protein PCP4a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EPA_FHM_2.0 Primary Assembly

Genomic

  1. NW_024121210.1 Reference EPA_FHM_2.0 Primary Assembly

    Range
    16905728..16921250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039675556.1 → XP_039531490.1  calmodulin regulator protein PCP4a

Nucleotide Protein
Heading Accession and Version

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