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KLF11 KLF transcription factor 11 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120401744, updated on 21-Mar-2024

Summary

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Gene symbol
KLF11
Gene description
KLF transcription factor 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See KLF11 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 3 NC_052625.1 (178972485..178986245)

Linkage Group 3 - NC_052625.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor, RNA polymerase I subunit B Neighboring gene grainyhead like transcription factor 1 Neighboring gene cystin 1 Neighboring gene ribonucleotide reductase regulatory subunit M2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052625.1 Chromosome 3 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 11
Names
Kruppel like factor 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052625.1 Reference ASM1616193v1 Primary Assembly

    Range
    178972485..178986245
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039531945.1 → XP_039387879.1  Krueppel-like factor 11 isoform X1

    Conserved Domains (4) summary
    COG5048
    Location:404 → 460
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:410 → 429
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:465 → 487
    zf-C2H2; Zinc finger, C2H2 type
    cd21584
    Location:37 → 405
    KLF11_N; N-terminal domain of Kruppel-like factor 11

  2. XM_039531947.1 → XP_039387881.1  Krueppel-like factor 11 isoform X3

    Conserved Domains (4) summary
    sd00017
    Location:314 → 336
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:342 → 364
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:328 → 351
    zf-H2C2_2; Zinc-finger double domain
    cl41731
    Location:37 → 199
    KLF10_11_N; N-terminal domain of Kruppel-like factor (KLF) 10, KLF11, and similar proteins

  3. XM_039531948.1 → XP_039387882.1  Krueppel-like factor 11 isoform X4

    Conserved Domains (1) summary
    cl41731
    Location:37 → 199
    KLF10_11_N; N-terminal domain of Kruppel-like factor (KLF) 10, KLF11, and similar proteins

  4. XM_039531946.1 → XP_039387880.1  Krueppel-like factor 11 isoform X2

    Conserved Domains (4) summary
    COG5048
    Location:354 → 410
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:360 → 379
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:415 → 437
    zf-C2H2; Zinc finger, C2H2 type
    cd21584
    Location:1 → 355
    KLF11_N; N-terminal domain of Kruppel-like factor 11

RNA

  1. XR_005596696.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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