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LOC120285797 histone H3 [ Drosophila simulans ]

Gene ID: 120285797, updated on 15-Sep-2023

Summary

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Gene symbol
LOC120285797
Gene description
histone H3
Locus tag
Dsimw501_GD28614
See related
EnsemblRapid:LOC120285797
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila simulans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GD28614; GD28614-PA
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Genomic context

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See LOC120285797 in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Prin_Dsim_3.1 (GCF_016746395.2) 2L NC_052520.2 (21171678..21177255)
102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) 2L NC_052520.1 (21171506..21177078)

Chromosome 2L - NC_052520.2Genomic Context describing neighboring genes Neighboring gene histone H2B Neighboring gene histone H2A Neighboring gene uncharacterized LOC27207587 Neighboring gene histone H1-like Neighboring gene histone H2B Neighboring gene histone H2A-like Neighboring gene histone H3-like Neighboring gene histone H1 Neighboring gene uncharacterized LOC123327107

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H3
Names
Dsim\GD28614
Dsim\GD28614-PA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dsim_3.1

Genomic

  1. NC_052520.2 Reference Prin_Dsim_3.1

    Range
    21171678..21177255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039298413.2 → XP_039154347.1  histone H3

    UniProtKB/TrEMBL
    O02648, Q76N01
    Related
    XP_039154347.1, XM_039298413.2
    Conserved Domains (1) summary
    PTZ00018
    Location:1 → 136
    PTZ00018; histone H3; Provisional

  2. XM_044923487.1 → XP_044779422.1  histone H3

    UniProtKB/TrEMBL
    O02648, Q76N01
    Related
    XP_044779422.1, XM_044923487.1
    Conserved Domains (1) summary
    PTZ00018
    Location:1 → 136
    PTZ00018; histone H3; Provisional
Nucleotide Protein Strain
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