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LOC120284354 probable cytosolic Fe-S cluster assembly factor GD17698 [ Drosophila simulans ]

Gene ID: 120284354, updated on 19-Jun-2024

Summary

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Gene symbol
LOC120284354
Gene description
probable cytosolic Fe-S cluster assembly factor GD17698
Locus tag
Dsimw501_GD17698
See related
EnsemblRapid:LOC120284354
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila simulans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GD17698; GD17698-PB; GD17698-PC
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Genomic context

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See LOC120284354 in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Prin_Dsim_3.1 (GCF_016746395.2) 2R NC_052521.2 (942705..944917, complement)
102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) 2R NC_052521.1 (942694..944906, complement)

Chromosome 2R - NC_052521.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123327158 Neighboring gene uncharacterized LOC123327159 Neighboring gene uncharacterized LOC123327160 Neighboring gene serine/threonine-protein kinase haspin homolog Neighboring gene uncharacterized LOC120284408

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in iron-sulfur cluster assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic [4Fe-4S] assembly targeting complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable cytosolic Fe-S cluster assembly factor GD17698
Names
Dsim\GD17698
Dsim\GD17698-PB
Dsim\GD17698-PC
dsim_GLEANR_17950

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dsim_3.1

Genomic

  1. NC_052521.2 Reference Prin_Dsim_3.1

    Range
    942705..944917 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039291468.1 → XP_039147402.1  probable cytosolic Fe-S cluster assembly factor GD17698 isoform X1

    UniProtKB/Swiss-Prot
    B4NSS7
    UniProtKB/TrEMBL
    A0A0J9R680
    Related
    XP_039147402.1, XM_039291468.1
    Conserved Domains (2) summary
    smart00902
    Location:419 → 465
    Fe_hyd_SSU; Iron hydrogenase small subunit
    pfam02906
    Location:111 → 403
    Fe_hyd_lg_C; Iron only hydrogenase large subunit, C-terminal domain

  2. XM_039291469.1 → XP_039147403.1  probable cytosolic Fe-S cluster assembly factor GD17698 isoform X2

    UniProtKB/TrEMBL
    A0A0J9TTE4
    Related
    XP_039147403.1, XM_039291469.1
    Conserved Domains (2) summary
    smart00902
    Location:238 → 284
    Fe_hyd_SSU; Iron hydrogenase small subunit
    pfam02906
    Location:1 → 222
    Fe_hyd_lg_C; Iron only hydrogenase large subunit, C-terminal domain
Nucleotide Protein Strain
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