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LOC120103001 40S ribosomal protein S20-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 120103001, updated on 14-Nov-2024

Summary

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Symbol
LOC120103001provided by RGD
Full Name
40S ribosomal protein S20-likeprovided by RGD
Primary source
RGD:41079011
See related
EnsemblRapid:ENSRNOG00000072129 AllianceGenome:RGD:41079011
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in cytosolic ribosome. Predicted to be part of small ribosomal subunit. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See LOC120103001 in Genome Data Viewer
Location:
5q36
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (151355182..151357451, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (146070683..146072034, complement)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene NOP10 ribonucleoprotein, pseudogene 1 Neighboring gene uncharacterized LOC120103000 Neighboring gene ribosomal protein S6 kinase A1 Neighboring gene basic transcription factor 3 like 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
small ribosomal subunit protein uS10-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    151355182..151357451 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063288632.1 → XP_063144702.1  small ribosomal subunit protein uS10-like

    UniProtKB/TrEMBL
    M0R5V6
    Related
    ENSRNOP00000100336.1, ENSRNOT00000139646.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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