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LOC120093129 vomeronasal type-2 receptor 116-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 120093129, updated on 4-Jan-2025

Summary

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Symbol
LOC120093129provided by RGD
Full Name
vomeronasal type-2 receptor 116-likeprovided by RGD
Primary source
RGD:41299569
See related
AllianceGenome:RGD:41299569
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See LOC120093129 in Genome Data Viewer
Location:
12p12
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (8366941..8466648)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (3569128..3668835)

Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene vomeronasal 2 receptor, 58 Neighboring gene vomeronasal 2 receptor, pseudogene 90 Neighboring gene uncharacterized LOC134481254 Neighboring gene proteasome 20S subunit alpha 6, pseudogene 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
vomeronasal type-2 receptor 116-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086030.1 Reference GRCr8

    Range
    8366941..8466648
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039089912.1 → XP_038945840.1  vomeronasal type-2 receptor 116-like

    UniProtKB/TrEMBL
    F1LW11
    Conserved Domains (3) summary
    cd15283
    Location:578 → 829
    7tmC_V2R_pheromone; vomeronasal type-2 pheromone receptors, member of the class C family of seven-transmembrane G protein-coupled receptors
    cd06365
    Location:34 → 497
    PBP1_pheromone_receptor; Ligand-binding domain of the V2R pheromone receptor, a member of the family C receptors within the G-protein coupled receptor superfamily
    pfam07562
    Location:505 → 558
    NCD3G; Nine Cysteines Domain of family 3 GPCR
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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