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hhatlb hedgehog acyltransferase like, b [ Scyliorhinus canicula (smaller spotted catshark) ]

Gene ID: 119966584, updated on 12-Sep-2024

Summary

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Gene symbol
hhatlb
Gene description
hedgehog acyltransferase like, b
Gene type
protein coding
RefSeq status
MODEL
Organism
Scyliorhinus canicula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Carcharhiniformes; Scyliorhinidae; Scyliorhinus
Orthologs
zebrafish all
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Genomic context

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See hhatlb in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
100 current sScyCan1.1 (GCF_902713615.1) 5 NC_052150.1 (218090700..218204025)

Chromosome 5 - NC_052150.1Genomic Context describing neighboring genes Neighboring gene HIG1 domain family member 1A, mitochondrial-like Neighboring gene coiled-coil domain containing 13 Neighboring gene kelch-like family member 40b Neighboring gene zinc finger and BTB domain containing 47b Neighboring gene 60S ribosomal protein L35a-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052150.1 Chromosome 5 Reference sScyCan1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of N-terminal protein palmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hedgehog acyltransferase like, b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scyliorhinus canicula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sScyCan1.1 Primary Assembly

Genomic

  1. NC_052150.1 Reference sScyCan1.1 Primary Assembly

    Range
    218090700..218204025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038798521.1 → XP_038654449.1  hedgehog acyltransferase like, b

    Conserved Domains (1) summary
    cl00738
    Location:127 → 451
    MBOAT; membrane-bound O-acyltransferase family

  2. XM_038798520.1 → XP_038654448.1  hedgehog acyltransferase like, b

    Conserved Domains (1) summary
    cl00738
    Location:127 → 451
    MBOAT; membrane-bound O-acyltransferase family
Nucleotide Protein
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