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SHOX SHOX homeobox [ Molossus molossus (Pallas's mastiff bat) ]

Gene ID: 118616794, updated on 30-Mar-2024

Summary

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Gene symbol
SHOX
Gene description
SHOX homeobox
Locus tag
HJG59_016500
Gene type
protein coding
RefSeq status
MODEL
Organism
Molossus molossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus
Orthologs
human all
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Genomic context

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See SHOX in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current mMolMol1.p (GCF_014108415.1) Unplaced Scaffold NW_023425380.1 (211134..220713, complement)

NW_023425380.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118616793 Neighboring gene protein phosphatase 2 regulatory subunit B''beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023425380 Unplaced Scaffold Reference mMolMol1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short stature homeobox protein
Names
short stature homeobox

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Molossus molossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMolMol1.p

Genomic

  1. NW_023425380.1 Reference mMolMol1.p

    Range
    211134..220713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036242233.1 → XP_036098126.1  short stature homeobox protein

    UniProtKB/TrEMBL
    A0A7J8B7C3
    Conserved Domains (2) summary
    pfam00046
    Location:120 → 174
    Homeobox; Homeobox domain
    pfam03826
    Location:272 → 288
    OAR; OAR domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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