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C15H18orf32 chromosome 15 C18orf32 homolog [ Rattus rattus (black rat) ]

Gene ID: 116884495, updated on 18-Mar-2024

Summary

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Gene symbol
C15H18orf32
Gene description
chromosome 15 C18orf32 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus rattus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Orthologs
human mouse all
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Genomic context

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See C15H18orf32 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Rrattus_CSIRO_v1 (GCF_011064425.1) 15 NC_046168.1 (56970176..56978743, complement)

Chromosome 15 - NC_046168.1Genomic Context describing neighboring genes Neighboring gene SMAD family member 7 Neighboring gene dymeclin Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORD58 Neighboring gene small nucleolar RNA SNORD58 Neighboring gene ribosomal protein L17

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046168.1 Chromosome 15 Reference Rrattus_CSIRO_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UPF0729 protein C18orf32 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus rattus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rrattus_CSIRO_v1 Primary Assembly

Genomic

  1. NC_046168.1 Reference Rrattus_CSIRO_v1 Primary Assembly

    Range
    56970176..56978743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032885617.1 → XP_032741508.1  UPF0729 protein C18orf32 homolog

    Conserved Domains (1) summary
    pfam14975
    Location:2 → 38
    DUF4512; Domain of unknown function (DUF4512)

  2. XM_032885618.1 → XP_032741509.1  UPF0729 protein C18orf32 homolog

    Conserved Domains (1) summary
    pfam14975
    Location:2 → 38
    DUF4512; Domain of unknown function (DUF4512)
Nucleotide Protein
Heading Accession and Version

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