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jim zinc finger protein jim [ Drosophila ananassae ]

Gene ID: 116655747, updated on 31-Dec-2024

Summary

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Gene symbol
jim
Gene description
zinc finger protein jim
Locus tag
Dana_GF23446
See related
EnsemblRapid:LOC116655747
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila ananassae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GF23446; GF23446-PB
Orthologs
fruit fly all
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Genomic context

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See jim in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM1763931v2 (GCF_017639315.1) 2R NC_057928.1 (4471067..4483827)
101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473439.1 (22569846..22582153, complement)

Chromosome 2R - NC_057928.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6493866 Neighboring gene uncharacterized LOC6506086 Neighboring gene uncharacterized LOC6493865 Neighboring gene secretory pathway calcium atpase Neighboring gene uncharacterized LOC123257142

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 768
Names
Dana\GF23446
Dana\GF23446-PB
Krueppel homolog 1
dana_GLEANR_8241

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1763931v2

Genomic

  1. NC_057928.1 Reference ASM1763931v2

    Range
    4471067..4483827
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032453664.2 → XP_032309555.1  zinc finger protein 768 isoform X1

    UniProtKB/TrEMBL
    B3MB89
    Related
    XP_032309555.1, XM_032453664.2
    Conserved Domains (2) summary
    COG5048
    Location:360 → 671
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:364 → 384
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_032453665.2 → XP_032309556.1  zinc finger protein 768 isoform X2

    UniProtKB/TrEMBL
    B3MB89
    Related
    XP_032309556.1, XM_032453665.2
    Conserved Domains (2) summary
    COG5048
    Location:360 → 670
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:364 → 384
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_032453666.2 → XP_032309557.1  zinc finger protein 768 isoform X3

    UniProtKB/TrEMBL
    B3MB89
    Related
    XP_032309557.1, XM_032453666.2
    Conserved Domains (2) summary
    COG5048
    Location:360 → 643
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:531 → 551
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_032453667.2 → XP_032309558.1  zinc finger protein 768 isoform X4

    UniProtKB/TrEMBL
    B3MB89
    Related
    XP_032309558.1, XM_032453667.2
    Conserved Domains (2) summary
    COG5048
    Location:360 → 642
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:531 → 551
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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