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LOC116412613 extensin-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 116412613, updated on 17-Aug-2024

Summary

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Official Symbol
LOC116412613provided by Xenbase
Official Full Name
extensin-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-29100107
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See LOC116412613 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (216521791..216522624, complement)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene oocyte zinc finger protein XlCOF29-like Neighboring gene cAMP responsive element binding protein 3 Neighboring gene talin 1 Neighboring gene tropomyosin 2 Neighboring gene CUB and zona pellucida-like domain-containing protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030677.2 Chromosome 1 Reference UCB_Xtro_10.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
extensin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    216521791..216522624 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031906862.1 → XP_031762722.1  extensin-like

    UniProtKB/TrEMBL
    A0A8J1JXU8
    Conserved Domains (1) summary
    PHA03247
    Location:5 → 152
    PHA03247; large tegument protein UL36; Provisional
Nucleotide Protein Strain
Heading Accession and Version

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