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LOC115484392 lens fiber major intrinsic protein [ Serinus canaria (Common canary) ]

Gene ID: 115484392, updated on 12-Aug-2024

Summary

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Gene symbol
LOC115484392
Gene description
lens fiber major intrinsic protein
See related
EnsemblRapid:ENSSCAG00000018763
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
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Genomic context

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See LOC115484392 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) Unplaced Scaffold NW_026108585.1 (2536..4771)

NW_026108585.1Genomic Context describing neighboring genes Neighboring gene aquaporin-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026108585 Unplaced Scaffold Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables water channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lens fiber major intrinsic protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NW_026108585.1 Reference serCan2020 Primary Assembly

    Range
    2536..4771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050987918.1 → XP_050843875.1  lens fiber major intrinsic protein

    Related
    ENSSCAP00000032554.1, ENSSCAT00000038633.1
Nucleotide Protein
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