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AFG3L2 AFG3 like matrix AAA peptidase subunit 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 114673744, updated on 17-Aug-2024

Summary

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Official Symbol
AFG3L2provided by VGNC
Official Full Name
AFG3 like matrix AAA peptidase subunit 2provided by VGNC
Primary source
VGNC:VGNC:104218
See related
Ensembl:ENSMMUG00000058099
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See AFG3L2 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 18 NC_041771.1 (73003448..73052553, complement)

Chromosome 18 - NC_041771.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene tubulin beta 6 class V Neighboring gene U7 small nuclear RNA Neighboring gene PRELI domain containing 3A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041771.1 Chromosome 18 Reference Mmul_10 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial protein processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein-containing complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of m-AAA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AFG3-like protein 2
Names
AFG3 ATPase family gene 3-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041771.1 Reference Mmul_10 Primary Assembly

    Range
    73003448..73052553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028837935.1 → XP_028693768.1  AFG3-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A5F8ADW0, G7NK86
    Related
    ENSMMUP00000075572.1, ENSMMUT00000100228.1
    Conserved Domains (2) summary
    TIGR01241
    Location:256 → 749
    FtsH_fam; ATP-dependent metalloprotease FtsH
    pfam06480
    Location:149 → 245
    FtsH_ext; FtsH Extracellular

  2. XM_028837936.1 → XP_028693769.1  AFG3-like protein 2 isoform X2

    UniProtKB/TrEMBL
    G7NK86
    Conserved Domains (2) summary
    TIGR01241
    Location:239 → 732
    FtsH_fam; ATP-dependent metalloprotease FtsH
    pfam06480
    Location:132 → 228
    FtsH_ext; FtsH Extracellular
Nucleotide Protein
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