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elovl5 ELOVL fatty acid elongase 5 [ Perca flavescens (yellow perch) ]

Gene ID: 114572011, updated on 15-Mar-2024

Summary

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Gene symbol
elovl5
Gene description
ELOVL fatty acid elongase 5
Locus tag
EPR50_G00177660
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
human zebrafish all
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Genomic context

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See elovl5 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 17 NC_041347.1 (16398023..16411745)

Chromosome 17 - NC_041347.1Genomic Context describing neighboring genes Neighboring gene kelch-like family member 31 Neighboring gene glutamate-cysteine ligase, catalytic subunit Neighboring gene F-box protein 9 Neighboring gene ciliogenesis associated kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041347.1 Chromosome 17 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid elongase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation, monounsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, polyunsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, saturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation of very long chain fatty acids protein 5
Names
longation of very long chain fatty acids protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041347.1 Reference PFLA_1.0 Primary Assembly

    Range
    16398023..16411745
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028603383.1 → XP_028459184.1  elongation of very long chain fatty acids protein 5

    UniProtKB/TrEMBL
    A0A484CCG2, F1C755
    Conserved Domains (1) summary
    pfam01151
    Location:28 → 256
    ELO; GNS1/SUR4 family
Nucleotide Protein
Heading Accession and Version

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