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slc27a6 solute carrier family 27 member 6 [ Perca flavescens (yellow perch) ]

Gene ID: 114571454, updated on 12-Sep-2024

Summary

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Gene symbol
slc27a6
Gene description
solute carrier family 27 member 6
Locus tag
EPR50_G00165410
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
zebrafish all
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Genomic context

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See slc27a6 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 16 NC_041346.1 (799842..850267, complement)

Chromosome 16 - NC_041346.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114570480 Neighboring gene membrane integral NOTCH2 associated receptor 2 Neighboring gene solute carrier family 12 member 2 Neighboring gene lamin B1 Neighboring gene proline-rich coiled-coil 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041346.1 Chromosome 16 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain fatty acid transport protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041346.1 Reference PFLA_1.0 Primary Assembly

    Range
    799842..850267 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028602388.1 → XP_028458189.1  long-chain fatty acid transport protein 6

    UniProtKB/TrEMBL
    A0A484CKQ8, F1C752
    Conserved Domains (1) summary
    cl17068
    Location:77 → 613
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein
Heading Accession and Version

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