U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC11444671 probable carboxylesterase 8 [ Medicago truncatula (barrel medic) ]

Gene ID: 11444671, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC11444671
Gene description
probable carboxylesterase 8
Locus tag
MtrunA17_Chr8g0351201
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC11444671 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 8 NC_053049.1 (13376868..13378001, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 8 NC_016414.2 (12937216..12938289, complement)

Chromosome 8 - NC_053049.1Genomic Context describing neighboring genes Neighboring gene UTP:RNA uridylyltransferase 1 Neighboring gene probable carboxylesterase 9 Neighboring gene probable carboxylesterase 8 Neighboring gene receptor-like serine/threonine-protein kinase At2g45590

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable carboxylesterase 8
Names
gibberellin receptor GID1
putative carboxylesterase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053049.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    13376868..13378001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003627599.3 → XP_003627647.1  probable carboxylesterase 8

    See identical proteins and their annotated locations for XP_003627647.1

    UniProtKB/TrEMBL
    G7LCQ6
    Conserved Domains (1) summary
    pfam07859
    Location:82 → 304
    Abhydrolase_3; alpha/beta hydrolase fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials