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LOC11439881 receptor-like serine/threonine-protein kinase At2g45590 [ Medicago truncatula (barrel medic) ]

Gene ID: 11439881, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11439881
Gene description
receptor-like serine/threonine-protein kinase At2g45590
Locus tag
MtrunA17_Chr8g0351221
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC11439881 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 8 NC_053049.1 (13391849..13394274, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 8 NC_016414.2 (12952130..12954528, complement)

Chromosome 8 - NC_053049.1Genomic Context describing neighboring genes Neighboring gene probable carboxylesterase 8 Neighboring gene probable carboxylesterase 8 Neighboring gene calcium-dependent lipid-binding protein Neighboring gene phosphopantothenoylcysteine decarboxylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-like serine/threonine-protein kinase At2g45590
Names
putative protein kinase RLK-Pelle-RLCK-XI family
receptor-like Serine/Threonine-kinase plant

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053049.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    13391849..13394274 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003627603.4 → XP_003627651.3  receptor-like serine/threonine-protein kinase At2g45590

    UniProtKB/TrEMBL
    A0A0C3XYN5, A0A396GKL2, G7LCR0
    Conserved Domains (1) summary
    cl21453
    Location:89 → 235
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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