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LOC11435789 peroxidase 42 [ Medicago truncatula (barrel medic) ]

Gene ID: 11435789, updated on 7-Dec-2023

Summary

Gene symbol
LOC11435789
Gene description
peroxidase 42
Locus tag
MtrunA17_Chr4g0074851
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

See LOC11435789 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 4 NC_053045.1 (63361223..63363701, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 4 NC_016410.2 (55184320..55186799, complement)

Chromosome 4 - NC_053045.1Genomic Context describing neighboring genes Neighboring gene calcium-dependent protein kinase 2-like Neighboring gene uncharacterized LOC11440100 Neighboring gene tRNA wybutosine-synthesizing protein 2/3/4 Neighboring gene uncharacterized LOC11444182

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
peroxidase 42
Names
cationic peroxidase
putative peroxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053045.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    63361223..63363701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003610383.3XP_003610431.1  peroxidase 42

    See identical proteins and their annotated locations for XP_003610431.1

    UniProtKB/TrEMBL
    G7JJ71, G7JJ72
    Conserved Domains (1) summary
    cd00693
    Location:31326
    secretory_peroxidase; Horseradish peroxidase and related secretory plant peroxidases

RNA

  1. XR_005645731.1 RNA Sequence