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LOC114324135 probable protein phosphatase 2C 10 [ Camellia sinensis ]

Gene ID: 114324135, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114324135
Gene description
probable protein phosphatase 2C 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Camellia sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia
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Genomic context

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See LOC114324135 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current AHAU_CSS_1 (GCF_004153795.1) Unplaced Scaffold NW_021025367.1 (2917764..2927521, complement)

NW_021025367.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114324134 Neighboring gene separase-like Neighboring gene uncharacterized LOC114255761 Neighboring gene uncharacterized LOC114324084

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021025367 Unplaced Scaffold Reference AHAU_CSS_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable protein phosphatase 2C 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camellia sinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AHAU_CSS_1 Primary Assembly

Genomic

  1. NW_021025367.1 Reference AHAU_CSS_1 Primary Assembly

    Range
    2917764..2927521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028271878.1 → XP_028127679.1  probable protein phosphatase 2C 10 isoform X2

    UniProtKB/TrEMBL
    A0A7J7GSY4
    Conserved Domains (1) summary
    cd00143
    Location:21 → 269
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  2. XM_028271877.1 → XP_028127678.1  probable protein phosphatase 2C 10 isoform X1

    UniProtKB/TrEMBL
    A0A7J7GSY4
    Conserved Domains (1) summary
    cd00143
    Location:33 → 281
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  3. XM_028271880.1 → XP_028127681.1  probable protein phosphatase 2C 10 isoform X4

    Conserved Domains (1) summary
    cd00143
    Location:7 → 223
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  4. XM_028271879.1 → XP_028127680.1  probable protein phosphatase 2C 10 isoform X3

    UniProtKB/TrEMBL
    A0A7J7GSY4
    Conserved Domains (1) summary
    cd00143
    Location:33 → 238
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
Nucleotide Protein
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