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LOC11424725 (DL)-glycerol-3-phosphatase 2 [ Medicago truncatula (barrel medic) ]

Gene ID: 11424725, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11424725
Gene description
(DL)-glycerol-3-phosphatase 2
Locus tag
MtrunA17_Chr4g0072381
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC11424725 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 4 NC_053045.1 (61458533..61463168, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 4 NC_016410.2 (53314554..53319186, complement)

Chromosome 4 - NC_053045.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112421227 Neighboring gene auxin-responsive protein IAA33 Neighboring gene uncharacterized LOC112420973 Neighboring gene histone H4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerol-3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
(DL)-glycerol-3-phosphatase 2
Names
haloacid dehalogenase-like hydrolase
putative glycerol-1-phosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053045.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    61458533..61463168 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003610069.4 → XP_003610117.1  (DL)-glycerol-3-phosphatase 2

    See identical proteins and their annotated locations for XP_003610117.1

    UniProtKB/TrEMBL
    G7JVF5, I3SRL6
    Conserved Domains (1) summary
    PLN02811
    Location:81 → 298
    PLN02811; hydrolase
Nucleotide Protein
Heading Accession and Version

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