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LOC11424611 dof zinc finger protein DOF5.7 [ Medicago truncatula (barrel medic) ]

Gene ID: 11424611, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11424611
Gene description
dof zinc finger protein DOF5.7
Locus tag
MtrunA17_Chr8g0367161
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC11424611 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 8 NC_053049.1 (30911958..30913612)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 8 NC_016414.2 (28436963..28438594)

Chromosome 8 - NC_053049.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112417403 Neighboring gene probable mannitol dehydrogenase Neighboring gene uncharacterized tRNA/rRNA methyltransferase slr1673 Neighboring gene probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dof zinc finger protein DOF5.7
Names
Dof domain zinc finger protein
putative transcription factor C2C2-Dof family

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053049.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    30911958..30913612
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003628835.3 → XP_003628883.1  dof zinc finger protein DOF5.7

    See identical proteins and their annotated locations for XP_003628883.1

    UniProtKB/TrEMBL
    G7LIJ3
    Conserved Domains (1) summary
    pfam02701
    Location:31 → 86
    zf-Dof; Dof domain, zinc finger
Nucleotide Protein
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