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LOC11419003 probable polyol transporter 6 [ Medicago truncatula (barrel medic) ]

Gene ID: 11419003, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11419003
Gene description
probable polyol transporter 6
Locus tag
MtrunA17_Chr8g0373531
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC11419003 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 8 NC_053049.1 (35633271..35636450, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 8 NC_016414.2 (33160905..33164028, complement)

Chromosome 8 - NC_053049.1Genomic Context describing neighboring genes Neighboring gene putative proline-rich receptor-like protein kinase PERK6 Neighboring gene acidic leucine-rich nuclear phosphoprotein 32-related protein Neighboring gene zinc finger protein GAI-ASSOCIATED FACTOR 1 Neighboring gene scarecrow-like protein 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable polyol transporter 6
Names
polyol/monosaccharide transporter 1
putative major facilitator, sugar transporter, major facilitator superfamily

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053049.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    35633271..35636450 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003629426.3 → XP_003629474.1  probable polyol transporter 6

    See identical proteins and their annotated locations for XP_003629474.1

    UniProtKB/TrEMBL
    B7FM46, G7LEU7
    Conserved Domains (1) summary
    pfam00083
    Location:22 → 482
    Sugar_tr; Sugar (and other) transporter
Nucleotide Protein
Heading Accession and Version

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