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LOC11412103 glycine-rich domain-containing protein 2 [ Medicago truncatula (barrel medic) ]

Gene ID: 11412103, updated on 22-Apr-2023

Summary

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Gene symbol
LOC11412103
Gene description
glycine-rich domain-containing protein 2
Locus tag
MtrunA17_Chr1g0192341
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC11412103 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 1 NC_053042.1 (41029343..41033702, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 1 NC_016407.2 (37172773..37177148, complement)

Chromosome 1 - NC_053042.1Genomic Context describing neighboring genes Neighboring gene probable pectinesterase/pectinesterase inhibitor 21 Neighboring gene probable pectinesterase/pectinesterase inhibitor 41 Neighboring gene F-box protein PP2-B15 Neighboring gene uncharacterized LOC11426423

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
glycine-rich domain-containing protein 2
Names
DUF1399 family protein
putative Glycine-rich domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053042.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    41029343..41033702 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003591123.4 → XP_003591171.1  glycine-rich domain-containing protein 2

    See identical proteins and their annotated locations for XP_003591171.1

    UniProtKB/TrEMBL
    G7I8S2
    Conserved Domains (1) summary
    pfam07173
    Location:105 → 245
    GRDP-like; Glycine-rich domain-containing protein-like

RNA

  1. XR_003011611.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases