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LOC11407113 indole-3-acetic acid-amido synthetase GH3.6 [ Medicago truncatula (barrel medic) ]

Gene ID: 11407113, updated on 7-Dec-2023

Summary

Gene symbol
LOC11407113
Gene description
indole-3-acetic acid-amido synthetase GH3.6
Locus tag
MtrunA17_Chr2g0318991
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

See LOC11407113 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 2 NC_053043.1 (40480997..40484094)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 2 NC_016408.2 (34379143..34382240)

Chromosome 2 - NC_053043.1Genomic Context describing neighboring genes Neighboring gene NAD(P)H dehydrogenase (quinone) FQR1 Neighboring gene transcription factor bHLH123 Neighboring gene uncharacterized LOC120578245 Neighboring gene organic cation/carnitine transporter 4

Genomic regions, transcripts, and products

General protein information

Preferred Names
indole-3-acetic acid-amido synthetase GH3.6
Names
putative GH3 family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053043.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    40480997..40484094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003596498.4XP_003596546.1  indole-3-acetic acid-amido synthetase GH3.6

    See identical proteins and their annotated locations for XP_003596546.1

    UniProtKB/TrEMBL
    A2Q639
    Conserved Domains (1) summary
    cl21606
    Location:3606
    GH3; GH3 auxin-responsive promoter