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PRR5 proline rich 5 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 114019959, updated on 15-Mar-2024

Summary

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Gene symbol
PRR5
Gene description
proline rich 5
Locus tag
UY3_08855
See related
EnsemblRapid:ENSCMYG00015014356
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See PRR5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 1 NC_057849.1 (225300513..225429638, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 1 NC_051241.1 (225299601..225429803, complement)

Chromosome 1 - NC_057849.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein 21B Neighboring gene uncharacterized LOC122464016 Neighboring gene Rho GTPase activating protein 8 Neighboring gene shisa like 1 Neighboring gene uncharacterized LOC122464028 Neighboring gene parvin gamma

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in TORC2 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TORC2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proline-rich protein 5
Names
Proline-rich protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057849.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    225300513..225429638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037914682.2 → XP_037770610.1  proline-rich protein 5 isoform X4

    Conserved Domains (1) summary
    pfam08539
    Location:32 → 150
    HbrB; HbrB-like

  2. XM_037914667.2 → XP_037770595.1  proline-rich protein 5 isoform X3

    Conserved Domains (1) summary
    pfam08539
    Location:41 → 159
    HbrB; HbrB-like

  3. XM_037914674.2 → XP_037770602.1  proline-rich protein 5 isoform X4

    Related
    ENSCMYP00015022212.1, ENSCMYT00015026964.1
    Conserved Domains (1) summary
    pfam08539
    Location:32 → 150
    HbrB; HbrB-like

  4. XM_043537882.1 → XP_043393817.1  proline-rich protein 5 isoform X3

    Related
    ENSCMYP00015022209.1, ENSCMYT00015026961.1
    Conserved Domains (1) summary
    pfam08539
    Location:41 → 159
    HbrB; HbrB-like

  5. XM_043537869.1 → XP_043393804.1  proline-rich protein 5 isoform X1

    Related
    ENSCMYP00015022204.1, ENSCMYT00015026955.1

  6. XM_043537880.1 → XP_043393815.1  proline-rich protein 5 isoform X3

    Conserved Domains (1) summary
    pfam08539
    Location:41 → 159
    HbrB; HbrB-like

  7. XM_043537899.1 → XP_043393834.1  proline-rich protein 5 isoform X4

    Conserved Domains (1) summary
    pfam08539
    Location:32 → 150
    HbrB; HbrB-like

  8. XM_043537872.1 → XP_043393807.1  proline-rich protein 5 isoform X2

    Related
    ENSCMYP00015022198.1, ENSCMYT00015026943.1
Nucleotide Protein
Heading Accession and Version

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