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TADA2A transcriptional adaptor 2A [ Corapipo altera (White-ruffed manakin) ]

Gene ID: 113955196, updated on 3-Aug-2024

Summary

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Gene symbol
TADA2A
Gene description
transcriptional adaptor 2A
Gene type
protein coding
RefSeq status
MODEL
Organism
Corapipo altera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Corapipo
Orthologs
human mouse all
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Genomic context

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See TADA2A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM394572v1 (GCF_003945725.1) Unplaced Scaffold NW_020884935.1 (3346693..3371489)

NW_020884935.1Genomic Context describing neighboring genes Neighboring gene apoptosis antagonizing transcription factor Neighboring gene acetyl-CoA carboxylase alpha Neighboring gene dual specificity phosphatase 14 Neighboring gene synergin gamma

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020884935 Unplaced Scaffold Reference ASM394572v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SAGA-type complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional adapter 2-alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corapipo altera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM394572v1

Genomic

  1. NW_020884935.1 Reference ASM394572v1

    Range
    3346693..3371489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027660447.1 → XP_027516248.1  transcriptional adapter 2-alpha

Nucleotide Protein
Heading Accession and Version

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