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LOC113732696 cell division cycle protein 27 homolog B-like [ Coffea arabica (coffee) ]

Gene ID: 113732696, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113732696
Gene description
cell division cycle protein 27 homolog B-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Coffea arabica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Genomic context

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See LOC113732696 in Genome Data Viewer
Location:
chromosome: 2e
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Cara_1.0 (GCF_003713225.1) 2e NC_039901.1 (61514795..61526399)

Chromosome 2e - NC_039901.1Genomic Context describing neighboring genes Neighboring gene probable RNA helicase SDE3 Neighboring gene aldehyde oxidase GLOX-like Neighboring gene beta-amyrin 28-monooxygenase-like Neighboring gene serine/threonine-protein kinase EDR1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039901.1 Chromosome 2e Reference Cara_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell division cycle protein 27 homolog B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coffea arabica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cara_1.0 Primary Assembly

Genomic

  1. NC_039901.1 Reference Cara_1.0 Primary Assembly

    Range
    61514795..61526399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027258628.1 → XP_027114429.1  cell division cycle protein 27 homolog B-like

    UniProtKB/TrEMBL
    A0A6P6WG81
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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