U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC112295666 probable aldo-keto reductase 2 [ Physcomitrium patens ]

Gene ID: 112295666, updated on 20-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC112295666
Gene description
probable aldo-keto reductase 2
Locus tag
PHYPA_022611
Gene type
protein coding
RefSeq status
MODEL
Organism
Physcomitrium patens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC112295666 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Phypa V3 (GCF_000002425.4) 18 NC_037270.1 (1405755..1407975)

Chromosome 18 - NC_037270.1Genomic Context describing neighboring genes Neighboring gene probable polyol transporter 4 Neighboring gene myosin-3-like Neighboring gene dicarboxylate transporter 1, chloroplastic-like Neighboring gene dicarboxylate transporter 1, chloroplastic-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037270.1 Chromosome 18 Reference Phypa V3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldo-keto reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable aldo-keto reductase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Physcomitrella patens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Phypa V3 Primary Assembly

Genomic

  1. NC_037270.1 Reference Phypa V3 Primary Assembly

    Range
    1405755..1407975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024547529.1 → XP_024403297.1  probable aldo-keto reductase 2 isoform X3

    Conserved Domains (1) summary
    COG0667
    Location:9 → 341
    Tas; Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) [General function prediction only]

  2. XM_024547527.1 → XP_024403295.1  probable aldo-keto reductase 2 isoform X1

    UniProtKB/TrEMBL
    A9RMV1
    Conserved Domains (1) summary
    COG0667
    Location:9 → 317
    Tas; Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) [General function prediction only]

  3. XM_024547528.1 → XP_024403296.1  probable aldo-keto reductase 2 isoform X2

    Conserved Domains (1) summary
    COG0667
    Location:13 → 262
    Tas; Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) [General function prediction only]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases