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LOC111984352 beta-amyrin synthase [ Quercus suber ]

Gene ID: 111984352, updated on 3-Dec-2024

Summary

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Gene symbol
LOC111984352
Gene description
beta-amyrin synthase
Locus tag
CFP56_032521
Gene type
protein coding
RefSeq status
MODEL
Organism
Quercus suber
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Also known as
TTS1
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Genomic context

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See LOC111984352 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_06 current Cork oak 2.0 (GCF_002906115.3) Unplaced Scaffold NW_027070024.1 (397382..408246)
100 previous assembly CorkOak1.0 (GCF_002906115.1) Unplaced Scaffold NW_019816374.1 (224859..235005, complement)

NW_027070024.1Genomic Context describing neighboring genes Neighboring gene beta-amyrin 28-monooxygenase Neighboring gene beta-amyrin 28-monooxygenase Neighboring gene beta-amyrin synthase Neighboring gene beta-amyrin synthase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Oxidosqualene cyclases involved in the biosynthesis of triterpenoids in Quercus suber cork. Busta L, et al. Sci Rep, 2020 May 15. PMID 32415159, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-amyrin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in triterpenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-amyrin synthase
Names
multifunctional amyrin synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002906115.3-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cork oak 2.0

Genomic

  1. NW_027070024.1 Reference Cork oak 2.0

    Range
    397382..408246
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065764711.1 → XP_065620783.1  beta-amyrin synthase

    UniProtKB/TrEMBL
    A0A6M6AMF7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases