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LOC11175629 SET domain-containing protein 4 [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 11175629, updated on 22-Jun-2024

Summary

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Gene symbol
LOC11175629
Gene description
SET domain-containing protein 4
See related
VectorBase:AGAMI1_007331
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Also known as
AGAP013401
Orthologs
fruit fly all
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Genomic context

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See LOC11175629 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (99372738..99374358)

Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC5666883 Neighboring gene vitamin K-dependent gamma-carboxylase Neighboring gene ATP binding cassette subfamily B member 7 Neighboring gene 2-oxoglutarate dehydrogenase complex component E1 Neighboring gene 40S ribosomal protein S12 homolog tsunagi Neighboring gene E3 ubiquitin-protein ligase TRAIP

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K36 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone H3K4 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-lysine dimethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-lysine monomethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-lysine trimethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SET domain-containing protein 4
Names
AGAP013401-PA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    99372738..99374358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003435684.2 → XP_003435732.1  SET domain-containing protein 4

    See identical proteins and their annotated locations for XP_003435732.1

    UniProtKB/TrEMBL
    F5HLX3
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials