U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRNAP-AGG transfer RNA proline (anticodon AGG) [ Setaria italica (foxtail millet) ]

Gene ID: 111257170, updated on 3-Jun-2019

Summary

Go to the top of the page Help
Gene symbol
TRNAP-AGG
Gene description
transfer RNA proline (anticodon AGG)
Gene type
tRNA
RefSeq status
MODEL
Organism
Setaria italica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TRNAP-AGG in Genome Data Viewer
Location:
chromosome: IV
Annotation release Status Assembly Chr Location
103 current Setaria_italica_v2.0 (GCF_000263155.2) IV NC_028453.1 (40080992..40081063, complement)

Chromosome IV - NC_028453.1Genomic Context describing neighboring genes Neighboring gene putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 Neighboring gene TIMELESS-interacting protein Neighboring gene delta(24)-sterol reductase Neighboring gene gibberellin-regulated protein 2-like Neighboring gene uncharacterized LOC101757438

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_028453.1 Chromosome IV Reference Setaria_italica_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_italica_v2.0 Primary Assembly

Genomic

  1. NC_028453.1 Reference Setaria_italica_v2.0 Primary Assembly

    Range
    40080992..40081063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version