U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110983467 solute carrier family 35 member F5-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110983467, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC110983467
Gene description
solute carrier family 35 member F5-like
See related
EnsemblRapid:LOC110983467
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110983467 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091458.1 (265648..283395)

NW_019091458.1Genomic Context describing neighboring genes Neighboring gene L-selectin-like Neighboring gene tyrosine 3-monooxygenase-like Neighboring gene uncharacterized LOC110983468 Neighboring gene uncharacterized LOC110983431

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019091458 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of peptide transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
solute carrier family 35 member F5-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091458.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    265648..283395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022242749.1 → XP_022098441.1  solute carrier family 35 member F5-like

    UniProtKB/TrEMBL
    A0A8B7Z523
    Related
    XP_022098441.1, XM_022242749.1
    Conserved Domains (1) summary
    COG0697
    Location:184 → 420
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases