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LOC110774630 transcriptional corepressor LEUNIG-like [ Prunus avium (sweet cherry) ]

Gene ID: 110774630, updated on 21-Dec-2023

Summary

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Gene symbol
LOC110774630
Gene description
transcriptional corepressor LEUNIG-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus avium
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC110774630 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current PAV_r1.0 (GCF_002207925.1) Unplaced Scaffold NW_018923761.1 (14977..18575, complement)

NW_018923761.1Genomic Context describing neighboring genes Neighboring gene probable protein phosphatase 2C 22 Neighboring gene uncharacterized LOC110774633 Neighboring gene protein NLP6-like Neighboring gene cysteine-rich receptor-like protein kinase 28 Neighboring gene cysteine-rich receptor-like protein kinase 28

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018923761 Unplaced Scaffold Reference PAV_r1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional corepressor LEUNIG-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus avium Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAV_r1.0

Genomic

  1. NW_018923761.1 Reference PAV_r1.0

    Range
    14977..18575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021979198.1 → XP_021834890.1  transcriptional corepressor LEUNIG-like

    UniProtKB/TrEMBL
    A0A6P5U6S9
    Conserved Domains (2) summary
    sd00039
    Location:134 → 169
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:122 → 203
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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